PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F04422.1.p
Common NameEUGRSUZ_F04422
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB
Protein Properties Length: 184aa    MW: 21288 Da    PI: 8.4718
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F04422.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding538.2e-171057148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      + +WT+eEd +l+++++  G ++W +Ia++ g++R++k+c++rw +yl
  Eucgr.F04422.1.p 10 KEAWTAEEDRKLAEVIAVSGARRWQAIAAKAGLNRSGKSCRLRWMNYL 57
                      579*******************************************97 PP

2Myb_DNA-binding513.4e-1663108148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l
  Eucgr.F04422.1.p  63 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 108
                       78999*****************.*********.************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.994557IPR017930Myb domain
SuperFamilySSF466893.28E-288104IPR009057Homeodomain-like
SMARTSM007171.0E-14959IPR001005SANT/Myb domain
PfamPF002494.2E-161057IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-231264IPR009057Homeodomain-like
CDDcd001672.62E-101257No hitNo description
PROSITE profilePS5129425.67258112IPR017930Myb domain
SMARTSM007171.9E-1562110IPR001005SANT/Myb domain
PfamPF002491.4E-1463108IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.1E-2565112IPR009057Homeodomain-like
CDDcd001674.91E-1067108No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MEGRIKKINK EAWTAEEDRK LAEVIAVSGA RRWQAIAAKA GLNRSGKSCR LRWMNYLRPN  60
IKRGNISDQE EDLILRLHKL LGNRWSLIAG RLPGRTDNEI KNYWNSHLSK KINNRKEKQI  120
SQASSEGDEM EQVRELEEKK SSESSEDHLK AIASFDMDDL FDFSMRTPLN LGWPSEFLLS  180
EDDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A4e-2851142110B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F04422.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064040.11e-132PREDICTED: transcription factor MYB114-like
SwissprotQ9SEI04e-51WER_ARATH; Transcription factor WER
TrEMBLA0A059BYQ11e-132A0A059BYQ1_EUCGR; Uncharacterized protein (Fragment)
STRINGPOPTR_0003s06320.15e-76(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM4282646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.12e-51myb domain protein 66